{"id":777,"date":"2022-05-06T17:01:20","date_gmt":"2022-05-06T17:01:20","guid":{"rendered":"https:\/\/erzsoregan.voices.wooster.edu\/?p=777"},"modified":"2022-05-06T17:55:46","modified_gmt":"2022-05-06T17:55:46","slug":"thinh-huynh","status":"publish","type":"post","link":"https:\/\/erzsoregan.voices.wooster.edu\/?p=777","title":{"rendered":"Thinh Huynh"},"content":{"rendered":"\n<p class=\"has-medium-font-size\">Characterization of a Potential Novel Redox Partner in S. Cerevisiae Mitochondrial Disulfide Relay System and in silico Elucidating Its Essentiality<\/p>\n\n\n\n<p><strong>Class of 2022<\/strong><\/p>\n\n\n\n<p><strong>Biography<\/strong><\/p>\n\n\n\n<div class=\"wp-block-image is-style-rounded\"><figure class=\"alignright size-medium is-resized\"><img loading=\"lazy\" decoding=\"async\" src=\"https:\/\/erzsoregan.voices.wooster.edu\/wp-content\/uploads\/sites\/104\/2022\/05\/Thinh_profile-225x300.jpg\" alt=\"\" class=\"wp-image-791\" width=\"268\" height=\"357\" srcset=\"https:\/\/erzsoregan.voices.wooster.edu\/wp-content\/uploads\/sites\/104\/2022\/05\/Thinh_profile-225x300.jpg 225w, https:\/\/erzsoregan.voices.wooster.edu\/wp-content\/uploads\/sites\/104\/2022\/05\/Thinh_profile-768x1024.jpg 768w, https:\/\/erzsoregan.voices.wooster.edu\/wp-content\/uploads\/sites\/104\/2022\/05\/Thinh_profile-1152x1536.jpg 1152w, https:\/\/erzsoregan.voices.wooster.edu\/wp-content\/uploads\/sites\/104\/2022\/05\/Thinh_profile-1536x2048.jpg 1536w, https:\/\/erzsoregan.voices.wooster.edu\/wp-content\/uploads\/sites\/104\/2022\/05\/Thinh_profile-scaled.jpg 1920w\" sizes=\"auto, (max-width: 268px) 100vw, 268px\" \/><\/figure><\/div>\n\n\n\n<ul class=\"wp-block-list\"><li><em>Education<\/em><ul><li>Friendship Christian School, Suwanee, GA, 2018<\/li><\/ul><ul><li>The College of Wooster, BA in Biochemistry and Molecular Biology, 2022<\/li><\/ul><\/li><li><em>Professional experience<\/em><ul><li>International Student Scholarship<\/li><li>MD Anderson Cancer Center, CPRIT-CURE Research Intern<\/li><\/ul><ul><li>The College of Wooster, StemZone Intern, Research Assistant, Minorities in STEM secretary<\/li><\/ul><\/li><\/ul>\n\n\n\n<p><strong>IS Thesis Abstract<\/strong><\/p>\n\n\n\n<p>The mitochondrial disulfide relay system is a conserved pathway in eukaryotes. Via two essential components Mia40 and Erv1, the system drives the import of cysteine-rich proteins from the cytosol to the mitochondrial intermembrane space and aids their oxidative folding. Since cytochrome c, the downstream electron receptor of the pathway, is non-essential in&nbsp;<em>S. cerevisiae<\/em>, this suggests unknown redox components and a level of redundancy in the system. In&nbsp;most eukaryotic organisms, the pathway is essential thanks to its substrates\u2019 involvement in the respiratory chain. However, this is not sufficient in explaining the pathway\u2019s essentiality in&nbsp;<em>Saccharomyces cerevisiae,&nbsp;<\/em>as this single-celled eukaryote can survive and grow under anaerobic conditions, suggesting novel metabolic functions. Via cross-linking and co-immunoprecipitation experiments, our lab previously identified the flavodoxin-like protein Ycp4 cross-links with Erv1&nbsp;<em>in vivo<\/em>. Thus, we sought to characterize Ycp4 in the context of the disulfide relay system. Here, we demonstrate that Ycp4 forms disulfide-based homodimers and re-oxidizes reduced Mia40&nbsp;<em>in vitro<\/em>. Our findings suggest that Ycp4 is a non-essential redundant component of the pathway. To study the mechanism of its essentiality, we engaged an&nbsp;<em>in silico&nbsp;<\/em>approach in which we used flux balance analysis on two well-curated yeast genome-scale metabolic networks in a series of in silico knock-out experiments. We found that the essentiality of the mitochondrial disulfide relay system is connected to two other mitochondrial protein transport machineries: TIM22 and TIM23 pathways. Altogether, both approaches reveal different insights into the intricacy of this protein transport system.<\/p>\n\n\n\n<div class=\"wp-block-image is-style-default\"><figure class=\"alignleft size-full is-resized\"><img loading=\"lazy\" decoding=\"async\" src=\"https:\/\/erzsoregan.voices.wooster.edu\/wp-content\/uploads\/sites\/104\/2022\/05\/Thinh_figure.png\" alt=\"\" class=\"wp-image-788\" width=\"651\" height=\"302\" srcset=\"https:\/\/erzsoregan.voices.wooster.edu\/wp-content\/uploads\/sites\/104\/2022\/05\/Thinh_figure.png 470w, https:\/\/erzsoregan.voices.wooster.edu\/wp-content\/uploads\/sites\/104\/2022\/05\/Thinh_figure-300x139.png 300w\" sizes=\"auto, (max-width: 651px) 100vw, 651px\" \/><figcaption><strong>Figure 1.<\/strong> The molecular mechanism of action of Mia40 in yeast vs.  mammalians<\/figcaption><\/figure><\/div>\n\n\n\n<div class=\"wp-block-image is-style-default\"><figure class=\"alignleft size-large is-resized\"><img loading=\"lazy\" decoding=\"async\" src=\"https:\/\/erzsoregan.voices.wooster.edu\/wp-content\/uploads\/sites\/104\/2022\/05\/Thinh_poster2-1024x538.png\" alt=\"\" class=\"wp-image-787\" width=\"655\" height=\"344\" srcset=\"https:\/\/erzsoregan.voices.wooster.edu\/wp-content\/uploads\/sites\/104\/2022\/05\/Thinh_poster2-1024x538.png 1024w, https:\/\/erzsoregan.voices.wooster.edu\/wp-content\/uploads\/sites\/104\/2022\/05\/Thinh_poster2-300x158.png 300w, https:\/\/erzsoregan.voices.wooster.edu\/wp-content\/uploads\/sites\/104\/2022\/05\/Thinh_poster2-768x403.png 768w, https:\/\/erzsoregan.voices.wooster.edu\/wp-content\/uploads\/sites\/104\/2022\/05\/Thinh_poster2-1536x807.png 1536w, https:\/\/erzsoregan.voices.wooster.edu\/wp-content\/uploads\/sites\/104\/2022\/05\/Thinh_poster2-2048x1076.png 2048w\" sizes=\"auto, (max-width: 655px) 100vw, 655px\" \/><figcaption><strong>Figure 2. <\/strong>Thinh presenting his work at the Winter Q-Bio Conference, February, 2022<\/figcaption><\/figure><\/div>\n\n\n\n<p><\/p>\n\n\n\n<p><\/p>\n\n\n\n<p><\/p>\n\n\n\n<p><\/p>\n\n\n\n<p><\/p>\n\n\n\n<p><\/p>\n\n\n\n<p><strong>Webpage:&nbsp;<\/strong><a href=\"https:\/\/www.linkedin.com\/in\/emma-davidson-b8030a170\/\"><em>https:\/\/www.linkedin.com\/in\/thinh-huynh-842000\/<\/em><\/a><\/p>\n","protected":false},"excerpt":{"rendered":"<p>Characterization of a Potential Novel Redox Partner in S. Cerevisiae Mitochondrial Disulfide Relay System and in silico Elucidating Its Essentiality Class of 2022 Biography Education Friendship Christian School, Suwanee, GA, 2018 The College of Wooster, BA in Biochemistry and Molecular &hellip; <a href=\"https:\/\/erzsoregan.voices.wooster.edu\/?p=777\">Continue reading <span class=\"meta-nav\">&rarr;<\/span><\/a><\/p>\n","protected":false},"author":276,"featured_media":0,"comment_status":"closed","ping_status":"","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[1],"tags":[],"class_list":["post-777","post","type-post","status-publish","format-standard","hentry","category-uncategorized"],"_links":{"self":[{"href":"https:\/\/erzsoregan.voices.wooster.edu\/index.php?rest_route=\/wp\/v2\/posts\/777","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/erzsoregan.voices.wooster.edu\/index.php?rest_route=\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/erzsoregan.voices.wooster.edu\/index.php?rest_route=\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/erzsoregan.voices.wooster.edu\/index.php?rest_route=\/wp\/v2\/users\/276"}],"replies":[{"embeddable":true,"href":"https:\/\/erzsoregan.voices.wooster.edu\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=777"}],"version-history":[{"count":8,"href":"https:\/\/erzsoregan.voices.wooster.edu\/index.php?rest_route=\/wp\/v2\/posts\/777\/revisions"}],"predecessor-version":[{"id":812,"href":"https:\/\/erzsoregan.voices.wooster.edu\/index.php?rest_route=\/wp\/v2\/posts\/777\/revisions\/812"}],"wp:attachment":[{"href":"https:\/\/erzsoregan.voices.wooster.edu\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=777"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/erzsoregan.voices.wooster.edu\/index.php?rest_route=%2Fwp%2Fv2%2Fcategories&post=777"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/erzsoregan.voices.wooster.edu\/index.php?rest_route=%2Fwp%2Fv2%2Ftags&post=777"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}